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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106941972Popeye domain containing 3. (298 aa)    
Predicted Functional Partners:
tjp2
Tight junction protein 2a (zona occludens 2); Belongs to the MAGUK family.
     
 0.517
LOC106961235
Tight junction protein 1a; Belongs to the MAGUK family.
     
 0.517
LOC106937846
Tight junction protein 1b; Belongs to the MAGUK family.
     
 0.517
LOC106949667
Tight junction protein 3; Belongs to the MAGUK family.
     
 0.517
f13a1
Coagulation factor XIII, A1 polypeptide b.
      
 0.515
ildr2
Immunoglobulin-like domain containing receptor 2.
      
 0.515
pop4
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
      
 0.499
pop5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
      
 0.482
rhbdd1
Rhomboid domain containing 1.
    
 
 0.420
tbccd1
TBCC domain containing 1.
      
 0.403
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.