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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpxHemopexin a. (393 aa)    
Predicted Functional Partners:
ENSPLAP00000006971
Alpha-2-HS-glycoprotein 2.
   
  
 0.803
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.797
lcn2
Alpha-1-microglobulin/bikunin precursor.
   
 
 0.764
LOC106948279
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.764
LOC106947310
Fibrinogen alpha chain.
   
 0.760
fgg
Fibrinogen gamma chain.
   
 0.719
LOC106964102
TIMP metallopeptidase inhibitor 2a.
    
 0.694
ENSPLAP00000028960
Peptidase S1 domain-containing protein.
   
 0.662
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.645
LOC106936699
TIMP metallopeptidase inhibitor 2b.
    
 0.644
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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