STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ngrnNeugrin, neurite outgrowth associated. (301 aa)    
Predicted Functional Partners:
fastkd2
FAST kinase domains 2.
    
 
 0.835
trub2
TruB pseudouridine (psi) synthase family member 2.
    
 
 0.764
LOC106960329
RNA pseudouridine synthase D4.
    
 
 0.719
ddx28
DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.
    
 
 0.699
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
   
    0.621
LOC106948331
Pentatricopeptide repeat domain 1.
    
 
 0.602
rcc1l
RCC1 like.
    
 
 0.599
gtpbp10
GTP-binding protein 10 (putative).
   
  
 0.554
mrm3
Mitochondrial rRNA methyltransferase 3a.
    
 
 0.533
LOC106937620
Calcyon neuron-specific vesicular protein.
      
 0.497
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.