Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mybbp1aMYB binding protein (P160) 1a. (1230 aa)    
Predicted Functional Partners:
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.983
ddx21
DEAD (Asp-Glu-Ala-Asp) box helicase 21.
   
 0.983
baz1b
Bromodomain adjacent to zinc finger domain, 1B.
   
 0.982
sf3b1
Splicing factor 3b, subunit 1.
   
 0.980
utp4
UTP4 small subunit processome component.
   
 
 0.977
wdr43
WD repeat domain 43.
   
 
 0.972
ENSPLAP00000004636
Uncharacterized protein.
   
 
 0.971
ENSPLAP00000004637
BP28CT domain-containing protein.
   
 
 0.971
polr1a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.971
pum3
Pumilio RNA-binding family member 3.
   
   0.966
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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