STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106947962Nuclear receptor subfamily 2, group C, member 1. (610 aa)    
Predicted Functional Partners:
ENSPLAP00000013169
Uncharacterized protein.
    
  0.729
ncor2
Nuclear receptor corepressor 2.
   
 0.725
ENSPLAP00000029324
GPS2_interact domain-containing protein.
   
 0.725
ENSPLAP00000030918
Uncharacterized protein.
   
 0.725
nrip1
Nuclear receptor interacting protein 1b.
    
 0.701
JAZF1
JAZF zinc finger 1b.
    
 
 0.694
LOC106945358
JAZF zinc finger 1.
    
 
 0.694
HDAC3
Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.664
fkbp9
Peptidylprolyl isomerase.
    
 0.642
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.618
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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