STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106938010V-rel avian reticuloendotheliosis viral oncogene homolog A. (627 aa)    
Predicted Functional Partners:
nfkb1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
   
0.990
LOC106935622
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
   
 0.987
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
   
 0.987
nfkbie
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon.
   
 0.986
nfkb2
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).
   
0.979
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.978
kpna1
Importin subunit alpha; Belongs to the importin alpha family.
    
 0.974
LOC106939540
TANK-binding kinase 1.
   
 0.969
kpna3
Importin subunit alpha; Belongs to the importin alpha family.
    
  0.963
LOC106940496
Interleukin-1.
   
 
 0.963
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.