Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMP5Lysosomal associated membrane protein family member 5. (283 aa)    
Predicted Functional Partners:
ENSPLAP00000024771
Uncharacterized protein.
      
 0.639
LOC106938609
Uncharacterized protein; Belongs to the synuclein family.
   
 
 0.618
LOC106948771
Synuclein, gamma b (breast cancer-specific protein 1); Belongs to the synuclein family.
   
 
 0.618
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 
 0.537
nprl2
NPR2 like, GATOR1 complex subunit.
    
 
 0.534
nprl3
NPR3-like, GATOR1 complex subunit.
    
 
 0.525
wdr24
WD repeat domain 24.
    
 
 0.512
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
   0.509
kptn
Kaptin (actin binding protein).
    
   0.509
ENSPLAP00000016678
WD repeat domain 59.
    
   0.509
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.