STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMP5Lysosomal associated membrane protein family member 5. (283 aa)    
Predicted Functional Partners:
nprl2
NPR2 like, GATOR1 complex subunit.
    
 
 0.639
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 
 0.638
nprl3
NPR3-like, GATOR1 complex subunit.
    
 
 0.620
wdr24
WD repeat domain 24.
    
 
 0.618
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
   0.604
kptn
Kaptin (actin binding protein).
    
   0.604
ENSPLAP00000016678
WD repeat domain 59.
    
   0.604
LOC106937241
Uncharacterized protein.
    
   0.604
ENSPLAP00000028649
Uncharacterized protein.
    
   0.604
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
   0.604
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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