Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000002189Zgc:63470. (251 aa)    
Predicted Functional Partners:
eif4h
Eukaryotic translation initiation factor 4h.
   
   0.971
eif4b
Eukaryotic translation initiation factor 4Bb.
   
   0.780
hras
HRas proto-oncogene, GTPase a.
    
   0.496
ENSPLAP00000003357
CSD_1 domain-containing protein.
    
   0.496
KRAS
KRAS proto-oncogene, GTPase.
    
   0.496
LOC106951627
Zgc:55558.
    
   0.496
CSDE1
Cold shock domain containing E1, RNA-binding.
    
   0.496
LOC106951921
Uncharacterized protein.
    
   0.495
LOC106938661
Paraspeckle component 1.
    
   0.495
nono
Non-POU domain containing, octamer-binding.
    
   0.495
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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