STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106955174Cyclic nucleotide gated channel subunit alpha 4. (548 aa)    
Predicted Functional Partners:
ENSPLAP00000007056
Si:dkey-44k1.5.
  
0.851
LOC106941815
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
  
0.840
LOC106958655
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.838
exoc4
Exocyst complex component 4.
     
 0.553
guca1b
Guanylate cyclase activator 1B.
   
 
 0.546
ENSPLAP00000010842
Calmodulin-like 4a.
     
 0.539
trabd
TraB domain containing.
    
   0.526
LOC106959869
Uncharacterized protein.
    
   0.510
surf1
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
    
   0.510
cnga2
Cyclic nucleotide gated channel alpha 2b.
  
  
0.502
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.