Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC106955174Cyclic nucleotide gated channel subunit alpha 4. (548 aa)    
Predicted Functional Partners:
LOC106941815
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
  
0.880
LOC106958655
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.878
ENSPLAP00000007056
Si:dkey-44k1.5.
  
0.876
guca1b
Guanylate cyclase activator 1B.
   
 0.568
cnga3
Cyclic nucleotide gated channel subunit alpha 3a.
  
  
 
0.554
ENSPLAP00000016485
Cyclic nucleotide-binding domain-containing protein.
  
  
 
0.554
LOC106949936
Cyclic nucleotide gated channel subunit alpha 1a.
  
  
 
0.554
LOC106935730
Cyclic nucleotide gated channel subunit alpha 1b.
  
  
 
0.553
cnga2
Cyclic nucleotide gated channel alpha 2b.
  
  
 
0.552
LOC106939176
Cyclic nucleotide-binding domain-containing protein.
  
  
 
0.551
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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