STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arid4aAT rich interactive domain 4A (RBP1-like). (1354 aa)    
Predicted Functional Partners:
wdr73
WD repeat domain 73.
   
 0.999
LOC106952289
Retinoblastoma binding protein 4.
   
 0.999
ENSPLAP00000014870
CAF1C_H4-bd domain-containing protein.
   
 0.999
actl6a
Actin-like 6A; Belongs to the actin family.
   
 0.998
sap30l
Sap30-like.
    
 0.998
sap18
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
   
 
 0.994
sin3a
SIN3 transcription regulator family member Aa.
    
 0.968
LOC106952614
SIN3 transcription regulator family member Ab.
    
 0.968
sin3b
SIN3 transcription regulator family member B.
    
 0.968
hdac8
Histone deacetylase 8; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.966
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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