STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106936789Activating transcription factor 4a. (424 aa)    
Predicted Functional Partners:
ddit3
DNA-damage-inducible transcript 3.
   
 0.989
LOC106952819
CCAAT enhancer binding protein beta.
   
 0.981
eif2ak3
Eukaryotic translation initiation factor 2-alpha kinase 3.
     
 0.978
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
     
 0.977
LOC106956531
Ribosomal protein S6 kinase.
     
 0.956
LOC106964557
Non-specific serine/threonine protein kinase.
     
 0.956
rps6ka3
Non-specific serine/threonine protein kinase.
     
 0.956
LOC106936744
Ribosomal protein S6 kinase.
     
 0.956
LOC106959505
Ribosomal protein S6 kinase.
     
 0.954
mknk2
MAPK interacting serine/threonine kinase 2b; Belongs to the protein kinase superfamily.
     
 0.954
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.