STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc4DnaJ (Hsp40) homolog, subfamily C, member 4. (237 aa)    
Predicted Functional Partners:
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.728
LOC106949839
Uncharacterized protein.
   
 
 0.600
dnajc7
DnaJ (Hsp40) homolog, subfamily C, member 7.
   
 
 0.600
ndufa9
NADH:ubiquinone oxidoreductase subunit A9a.
    
  0.557
dnajc25
DnaJ (Hsp40) homolog, subfamily C, member 25.
   
 
0.551
dnajc11
DnaJ (Hsp40) homolog, subfamily C, member 11a.
   
 
 0.550
LOC106963024
DnaJ (Hsp40) homolog, subfamily C, member 16.
   
 
 0.548
tmem254
Transmembrane protein 254.
    
  0.534
blvrb
Biliverdin reductase B.
    
  0.534
gak
Cyclin G associated kinase.
    
 
 0.523
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.