Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC106954534RAB25, member RAS oncogene family a. (215 aa)    
Predicted Functional Partners:
exoc2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.794
ENSPLAP00000019989
Uncharacterized protein.
    
 0.771
LOC106964665
RAB3A interacting protein (rabin3)-like 1.
    
 0.758
rab3ip
RAB3A interacting protein (rabin3).
    
 0.758
rab11fip4
RAB11 family interacting protein 4 (class II) b.
    
 0.757
LOC106960428
RAB11 family interacting protein 4 (class II) a.
    
 0.757
RAB11FIP3
RAB11 family interacting protein 3.
    
 0.757
rab11fip2
RAB11 family interacting protein 2 (class I).
  
 0.722
LOC106950388
Uncharacterized protein.
  
 0.722
ENSPLAP00000010703
RAB11 family interacting protein 1 (class I) b.
  
 0.722
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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