Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000002298UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (191 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
    
 0.949
LOC106952860
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.948
LOC106939562
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.901
ube2e1
Ubiquitin-conjugating enzyme E2E 1; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.901
LOC106945532
Si:ch73-335l21.4.
    
 0.831
rps27a
Ribosomal protein S27a.
    
 0.805
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.801
ENSPLAP00000000046
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.777
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.763
anapc11
APC11 anaphase promoting complex subunit 11 homolog (yeast).
    
 0.757
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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