STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106953628Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (595 aa)    
Predicted Functional Partners:
slc6a3
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
 
0.491
LOC106948462
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
 
0.491
LOC106963019
Amino acid transporter.
    
 0.484
slc1a1
Amino acid transporter.
    
 0.484
LOC106943501
Amino acid transporter.
    
 0.484
LOC106936268
Amino acid transporter.
    
 0.478
LOC106953454
Amino acid transporter.
    
 0.478
LOC106948679
Amino acid transporter.
    
 0.478
LOC106942541
Amino acid transporter.
    
 0.478
slc1a2
Amino acid transporter.
    
 0.476
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.