STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gm2aGM2 ganglioside activator. (203 aa)    
Predicted Functional Partners:
hexb
Beta-hexosaminidase.
    
 0.782
LOC106959479
Beta-hexosaminidase.
    
 0.782
LOC106934968
Family with sequence similarity 149 member B1.
    
 0.729
LOC106963521
Family with sequence similarity 149 member B1.
    
 0.729
etfa
Electron transfer flavoprotein subunit alpha.
      
 0.547
ENSPLAP00000010469
CDK5 regulatory subunit associated protein 2.
      
 0.524
cln3
Battenin.
      
 0.506
LOC106959914
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.504
OSBPL8
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.504
LOC106949174
Cytochrome b5 domain containing 2; Belongs to the cytochrome b5 family.
      
 0.489
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.