Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zbtb39Zinc finger and BTB domain containing 39. (641 aa)    
Predicted Functional Partners:
csrnp2
Cysteine-serine-rich nuclear protein 2.
      
 0.796
rnf166
Ring finger protein 166.
    
 0.746
crbn
Cereblon.
    
 
 0.706
ddx59
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59.
    
 
 0.696
ENSPLAP00000024335
Uncharacterized protein.
      
 0.687
LOC106958423
Uncharacterized protein.
      
 0.681
trmt1l
tRNA methyltransferase 1-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.643
ENSPLAP00000014192
NDK domain-containing protein.
    
 0.577
LOC106936974
Zinc finger protein 827.
      
 0.574
rab28
Uncharacterized protein.
    
 
 0.558
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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