STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106944567Solute carrier family 2 member 11b; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (502 aa)    
Predicted Functional Partners:
ENSPLAP00000018742
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
  0.681
trafd1
TRAF-type zinc finger domain containing 1.
    
 
 0.624
ENSPLAP00000025382
Uncharacterized protein.
   
  
 0.613
dct
Dopachrome tautomerase.
   
 
 0.610
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.596
gapdhs
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.596
LOC106952227
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.595
tk1
Thymidine kinase.
     
 0.593
ccdc117
Si:ch211-102c2.7.
      
 0.590
chek2
Checkpoint kinase 2.
   
  
 0.589
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.