STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106953185RRM domain-containing protein. (321 aa)    
Predicted Functional Partners:
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.984
LOC106954507
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.977
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.976
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.963
hnrnpa1
Heterogeneous nuclear ribonucleoprotein A1b.
   
 0.963
rbmx
RNA binding motif protein X-linked.
   
 0.960
hnrnpu
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.947
LOC106965063
RRM domain-containing protein.
  
  
 
0.902
ilf2
Interleukin enhancer binding factor 2.
   
 
 0.901
SRSF3
Serine and arginine rich splicing factor 3b.
   
 0.886
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.