STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000002433Uncharacterized protein. (406 aa)    
Predicted Functional Partners:
LOC106945532
Si:ch73-335l21.4.
  
 0.769
LOC106959947
Netrin g1a.
    
 0.761
LOC106948690
Vav 3 guanine nucleotide exchange factor b.
    
 0.761
col22a1
Collagen, type XXII, alpha 1.
    
 0.751
mgst1
Microsomal glutathione S-transferase 1.2.
     
 0.727
ptges
Prostaglandin E synthase.
     
 0.727
pla2g4a
Phospholipase A2.
   
 
 0.722
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
  0.721
LOC106956946
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
  0.721
ENSPLAP00000000818
Si:ch211-241f5.3; Belongs to the G-protein coupled receptor 2 family.
    
   0.713
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.