STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ch25hCholesterol 25-hydroxylase; Belongs to the sterol desaturase family. (248 aa)    
Predicted Functional Partners:
LOC106938689
Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
 0.993
LOC106936901
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
  
 0.989
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
0.985
LOC106958682
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
  
 0.982
LOC106956892
Uncharacterized protein.
  
 0.981
sqle
Squalene epoxidase a.
   
 0.976
dhcr7
7-dehydrocholesterol reductase.
   
 0.971
LOC106956894
Uncharacterized protein.
  
 0.969
dhcr24
24-dehydrocholesterol reductase.
  
 
 0.964
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.945
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.