Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106955162Bridging integrator 2b. (544 aa)    
Predicted Functional Partners:
LOC106935035
Alpha_adaptinC2 domain-containing protein.
    
   0.766
LOC106941734
VPS9 domain-containing protein.
   
 
 0.739
ap2s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 
 0.706
LOC106965067
Growth arrest-specific 7a.
    
 0.705
gas7
Growth arrest specific 7.
    
 0.705
ENSPLAP00000011367
Uncharacterized protein.
   
 
 0.650
synj1
Synaptojanin 1.
   
 
 0.650
arhgef38
Rho guanine nucleotide exchange factor (GEF) 38.
    
 
 0.639
dnmbp
Dynamin binding protein.
    
 
 0.639
was
WASP actin nucleation promoting factor a.
   
 
 0.623
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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