STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tiprlTIP41, TOR signaling pathway regulator-like (S. cerevisiae). (267 aa)    
Predicted Functional Partners:
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 0.952
LOC106960967
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.874
ppp4c
Serine/threonine-protein phosphatase.
   
 0.834
LOC106941149
Serine/threonine-protein phosphatase.
   
 0.806
ppp2ca
Serine/threonine-protein phosphatase.
   
 0.806
LOC106955401
Serine/threonine-protein phosphatase.
   
 0.806
aldh5a1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.803
PPP6C
Serine/threonine-protein phosphatase.
  
 0.774
LOC106956189
Serine/threonine-protein phosphatase.
  
 0.774
LOC106947281
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.655
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.