STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unc5bUnc-5 netrin receptor B. (916 aa)    
Predicted Functional Partners:
LOC106955588
Netrin 2.
    
 0.898
LOC106959604
Netrin 1b.
    
 0.889
NTN1
Netrin 1.
    
 0.864
LOC106945540
Netrin 5.
    
 0.861
neo1
Neogenin 1.
    
 0.859
ENSPLAP00000022093
Ig-like domain-containing protein.
    
 0.859
LOC106954291
Immunoglobulin superfamily, DCC subclass, member 4.
    
 0.803
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
    
 0.720
LOC106938905
Protein tyrosine phosphatase non-receptor type 11b.
    
 0.720
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
 0.720
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.