STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gatd1Glutamine amidotransferase like class 1 domain containing 1. (213 aa)    
Predicted Functional Partners:
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.906
LOC106961295
Troponin I type 2a (skeletal, fast), tandem duplicate 2.
   
 0.758
ENSPLAP00000000832
Uncharacterized protein.
   
 0.758
ENSPLAP00000000837
Troponin I4a.
   
 0.758
ENSPLAP00000000843
Uncharacterized protein.
   
 0.758
LOC106961381
Uncharacterized protein.
   
 0.758
LOC106961297
Troponin I2, fast skeletal type.
   
 0.758
LOC106961298
Troponin I2, fast skeletal type.
   
 0.758
LOC106945296
Troponin I4b, tandem duplicate 2.
   
 0.758
ENSPLAP00000019530
Troponin I4b, tandem duplicate 2.
   
 0.758
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.