STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gatad2bGATA zinc finger domain containing 2B. (684 aa)    
Predicted Functional Partners:
LOC106952289
Retinoblastoma binding protein 4.
   
 0.880
ENSPLAP00000014870
CAF1C_H4-bd domain-containing protein.
   
 0.880
LOC106951120
Uncharacterized protein.
   
 0.836
chd5
Chromodomain helicase DNA binding protein 5.
   
 0.836
mta1
Metastasis associated 1.
   
 0.836
LOC106952225
Chromodomain helicase DNA binding protein 4a.
   
 0.836
mta2
Metastasis associated 1 family, member 2.
   
 0.836
mta3
Metastasis associated 1 family, member 3.
   
 0.836
LOC106954568
Chromodomain helicase DNA binding protein 3.
   
 0.836
ENSPLAP00000029469
Autoimmune regulator.
   
 0.836
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.