LOC106947480 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC106947480

Uncharacterized protein; Belongs to the cytochrome P450 family. (541 aa)

Predicted Functional Partners:

suox

0.818

aasdh

0.801

ENSPLAP00000029844

0.755

asmtl

0.744

ENSPLAP00000029380

0.715

ENSPLAP00000018742

0.713

palb2

0.701

ndufab1

0.701

fdx1

0.698

fdx2

0.698

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000018742	ENSPLAP00000029380	ENSPLAP00000018742	ENSPLAP00000029380	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Epoxide hydrolase 2, cytoplasmic.	0.809
ENSPLAP00000018742	ENSPLAP00000029844	ENSPLAP00000018742	ENSPLAP00000029844	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Uncharacterized protein.	0.773
ENSPLAP00000018742	LOC106947480	ENSPLAP00000018742	ENSPLAP00000002641	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.713
ENSPLAP00000018742	aasdh	ENSPLAP00000018742	ENSPLAP00000014520	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Aminoadipate-semialdehyde dehydrogenase.	0.588
ENSPLAP00000018742	fdx1	ENSPLAP00000018742	ENSPLAP00000010073	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	2Fe-2S ferredoxin-type domain-containing protein.	0.871
ENSPLAP00000018742	fdx2	ENSPLAP00000018742	ENSPLAP00000014673	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Ferredoxin 2.	0.871
ENSPLAP00000018742	ndufab1	ENSPLAP00000018742	ENSPLAP00000010815	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.548
ENSPLAP00000018742	palb2	ENSPLAP00000018742	ENSPLAP00000004402	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	PALB2_WD40 domain-containing protein.	0.548
ENSPLAP00000018742	suox	ENSPLAP00000018742	ENSPLAP00000019550	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Sulfite oxidase.	0.955
ENSPLAP00000029380	ENSPLAP00000018742	ENSPLAP00000029380	ENSPLAP00000018742	Epoxide hydrolase 2, cytoplasmic.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.809
ENSPLAP00000029380	ENSPLAP00000029844	ENSPLAP00000029380	ENSPLAP00000029844	Epoxide hydrolase 2, cytoplasmic.	Uncharacterized protein.	0.636
ENSPLAP00000029380	LOC106947480	ENSPLAP00000029380	ENSPLAP00000002641	Epoxide hydrolase 2, cytoplasmic.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.715
ENSPLAP00000029380	aasdh	ENSPLAP00000029380	ENSPLAP00000014520	Epoxide hydrolase 2, cytoplasmic.	Aminoadipate-semialdehyde dehydrogenase.	0.838
ENSPLAP00000029380	ndufab1	ENSPLAP00000029380	ENSPLAP00000010815	Epoxide hydrolase 2, cytoplasmic.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.911
ENSPLAP00000029380	palb2	ENSPLAP00000029380	ENSPLAP00000004402	Epoxide hydrolase 2, cytoplasmic.	PALB2_WD40 domain-containing protein.	0.911
ENSPLAP00000029844	ENSPLAP00000018742	ENSPLAP00000029844	ENSPLAP00000018742	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.773
ENSPLAP00000029844	ENSPLAP00000029380	ENSPLAP00000029844	ENSPLAP00000029380	Uncharacterized protein.	Epoxide hydrolase 2, cytoplasmic.	0.636
ENSPLAP00000029844	LOC106947480	ENSPLAP00000029844	ENSPLAP00000002641	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.755
ENSPLAP00000029844	aasdh	ENSPLAP00000029844	ENSPLAP00000014520	Uncharacterized protein.	Aminoadipate-semialdehyde dehydrogenase.	0.811
ENSPLAP00000029844	asmtl	ENSPLAP00000029844	ENSPLAP00000009099	Uncharacterized protein.	Acetylserotonin O-methyltransferase-like.	0.708