STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106940328Uncharacterized protein. (1343 aa)    
Predicted Functional Partners:
bub3
BUB3 mitotic checkpoint protein.
   
 0.795
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.794
LOC106941438
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.761
LOC106943225
Mitotic spindle assembly checkpoint protein MAD2A-like.
   
 0.761
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.760
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
   
 0.758
ranbp2
RAN binding protein 2.
  
 0.754
tex10
Testis expressed 10.
   
 0.750
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
    
 0.750
anapc5
Anaphase promoting complex subunit 5.
    
 0.746
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.