STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106959860Synovial sarcoma, X breakpoint 2 interacting protein b. (585 aa)    
Predicted Functional Partners:
LOC106958892
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
  
  
 
0.956
actn1
Actinin, alpha 1.
     
 0.955
ACTN4
Actinin alpha 4.
     
 0.955
ENSPLAP00000014378
Uncharacterized protein.
    
  0.902
LOC106935365
Afadin, adherens junction formation factor a.
    
  0.902
LOC106946965
Uncharacterized protein.
    
  0.898
fto
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.698
actn3
Actinin alpha 3b.
     
 0.626
LOC106934973
Actinin, alpha 2b.
     
 0.626
alkbh7
AlkB homolog 7.
 
   
  0.586
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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