STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106946509LIM domain-containing protein. (325 aa)    
Predicted Functional Partners:
rsu1
Ras suppressor protein 1.
   
 0.973
ilk
Integrin linked kinase.
   
 0.941
ILK
Integrin linked kinase.
   
 0.941
LOC106942309
Parvin, beta.
   
 0.850
parva
Parvin, alpha a.
   
 0.850
ENSPLAP00000027046
Uncharacterized protein.
   
 0.850
LOC106942246
Beta-parvin-like.
   
 0.850
pidd1
P53-induced death domain protein 1.
    
 0.799
LOC106943529
Uncharacterized protein.
   
 0.788
ENSPLAP00000029877
annotation not available
   
 0.788
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.