Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pcmt1Protein-L-isoaspartate (D-aspartate) O-methyltransferase. (270 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
  
   0.882
aimp2
Aminoacyl tRNA synthetase complex interacting multifunctional protein 2.
    
   0.853
dera
Deoxyribose-phosphate aldolase (putative).
    
   0.820
bap1
Ubiquitin carboxyl-terminal hydrolase.
   
   0.785
scyl2
SCY1 like pseudokinase 2.
    
   0.776
LOC106937361
Cytochrome c oxidase copper chaperone COX17.
    
   0.775
rpia
Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).
  
   0.771
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
   0.764
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
    
   0.760
mettl6
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
    
 
 0.741
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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