STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iqubIQ motif and ubiquitin domain containing. (630 aa)    
Predicted Functional Partners:
armc4
Armadillo repeat containing 4.
  
 
 0.804
armc3
Armadillo repeat containing 3.
   
 
 0.782
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.727
nme7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
   
 0.707
efcab1
Uncharacterized protein.
   
 0.706
mapk15
Mitogen-activated protein kinase.
   
 0.686
LOC106947839
Mitogen-activated protein kinase.
   
 0.682
LOC106943627
Mitogen-activated protein kinase.
   
 0.682
LOC106947659
Mitogen-activated protein kinase.
   
 0.682
LOC106960475
Mitogen-activated protein kinase.
   
 0.682
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.