STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106952553Ankyrin 1, erythrocytic b. (1344 aa)    
Predicted Functional Partners:
ENSPLAP00000015359
Death domain-containing protein.
 
      0.859
rnf146
Ring finger protein 146.
    
 0.717
RNF146
Ring finger protein 146.
    
 0.717
LOC106959222
Uncharacterized protein.
    
 0.697
AXIN2
Axin 2.
    
 0.697
axin1
Axin 1.
    
 0.697
LOC106957085
Axin 2 (conductin, axil).
    
 0.697
LOC106940327
PH domain-containing protein.
   
 0.639
ENSPLAP00000004398
PH domain-containing protein.
   
 0.639
LOC106939270
Spectrin beta chain; Belongs to the spectrin family.
   
 0.639
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.