STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106964757Nucleoside diphosphate kinase. (154 aa)    
Predicted Functional Partners:
mrps16
Mitochondrial ribosomal protein S16.
  
 0.965
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
  
 0.963
mrps10
Mitochondrial ribosomal protein S10.
  
  0.963
mrps22
Mitochondrial ribosomal protein S22.
   
 0.961
nme6
Nucleoside diphosphate kinase.
  
 
0.958
mrps7
Mitochondrial ribosomal protein S7.
  
 0.956
LOC106951632
Nucleoside diphosphate kinase.
  
 
 
0.954
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
  
 0.952
ENSPLAP00000002570
Mitochondrial ribosomal protein S6.
  
  0.948
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
  
 0.945
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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