STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smim12Small integral membrane protein 12. (91 aa)    
Predicted Functional Partners:
snu13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
   0.887
mthfsd
Methenyltetrahydrofolate synthetase domain containing.
  
    0.874
utp15
UTP15 small subunit processome component.
   
  
 0.874
nop56
NOP56 ribonucleoprotein homolog.
   
   0.871
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
 0.868
LOC106940585
Uncharacterized protein.
  
 0.868
wdr6
WD repeat domain 6.
   
   0.849
LOC106962956
5'-nucleotidase, cytosolic IB b.
  
 0.786
LOC106952280
5'-nucleotidase, cytosolic IAb.
  
 0.786
LOC106945650
5'-nucleotidase, cytosolic IAa.
  
 0.786
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.