Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
smim12Small integral membrane protein 12. (91 aa)    
Predicted Functional Partners:
ccdc58
Coiled-coil domain containing 58.
    
   0.974
snu13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
   0.924
mthfsd
Methenyltetrahydrofolate synthetase domain containing.
  
    0.919
utp15
UTP15 small subunit processome component.
   
    0.918
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
 0.859
LOC106940585
Uncharacterized protein.
  
 0.859
LOC106946595
Anti-silencing function 1Ba histone chaperone.
   
    0.841
asf1b
Anti-silencing function 1Ba histone chaperone.
   
    0.841
wdr6
WD repeat domain 6.
   
   0.838
nop56
NOP56 ribonucleoprotein homolog.
   
   0.836
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.