Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000002885Uncharacterized protein. (72 aa)    
Predicted Functional Partners:
clic2
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
    
 
 0.701
ENSPLAP00000007582
Uncharacterized protein.
    
 0.632
LOC106941820
Uncharacterized protein.
     
 0.570
LOC106950586
Map3k7 C-terminal like.
   
 
 0.548
lsm1
U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.
    
   0.520
ENSPLAP00000006307
Sushi domain containing 1.
      
 0.504
LOC106964216
Xin actin binding repeat containing 2a.
    
  0.470
ENSPLAP00000011897
Uncharacterized protein.
    
  0.470
ENSPLAP00000026933
Xin actin binding repeat containing 2b.
    
  0.470
ENSPLAP00000010745
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
     0.469
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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