Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC106951932Si:ch1073-513e17.1. (517 aa)    
Predicted Functional Partners:
LOC106940033
MFS domain-containing protein.
  
  
 
0.904
slc17a5
Solute carrier family 17 member 5.
  
  
 
0.903
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.651
LOC106951829
Uncharacterized protein.
     
 0.651
EVC
EvC ciliary complex subunit 1.
      
 0.598
LOC106938208
DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.
    
 
 0.548
brap
BRCA1 associated protein.
      
 0.546
LOC106949934
Regulating synaptic membrane exocytosis 1a.
     
 0.545
LOC106945350
Regulating synaptic membrane exocytosis 3.
     
 0.545
LOC106945043
Solute carrier family 39 member 7.
   
  
 0.542
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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