STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC3AC-type lectin domain family 3 member A. (186 aa)    
Predicted Functional Partners:
usp47
Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family.
      
 0.538
LOC106947926
Dickkopf WNT signaling pathway inhibitor 3a.
      
 0.538
LOC106947923
Microtubule associated monooxygenase, calponin and LIM domain containing 2a.
      
 0.538
LOC106936637
Nuclear factor of activated T cells 5a.
      
 0.538
chrdl2
Chordin-like 2.
    
 0.535
syf2
SYF2 pre-mRNA-splicing factor.
      
 0.512
vat1l
Vesicle amine transport 1-like.
      
 0.505
tyrobp
Uncharacterized protein.
    
  0.487
wwox
WW domain containing oxidoreductase.
      
 0.487
LOC106947211
Zmp:0000000846.
    
  0.469
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.