STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106937426SH3 domain containing 19. (928 aa)    
Predicted Functional Partners:
ENSPLAP00000027318
SH3 and SYLF domain containing 1.
   
   0.675
vta1
Vesicle (multivesicular body) trafficking 1.
    
   0.657
noxo1
NADPH oxidase organizer 1a.
   
 0.648
LOC106963758
NADPH oxidase organizer 1b.
   
 0.634
ncf4
Neutrophil cytosolic factor 4.
    
0.628
sh3pxd2b
SH3 and PX domains 2B.
    
0.628
LOC106951954
SH3 and PX domains 2Aa.
    
 0.628
SH3PXD2A
SH3 and PX domains 2A.
    
 0.628
ncf1
Neutrophil cytosolic factor 1.
    
 0.628
LOC106948654
GTP cyclohydrolase 2.
    
   0.611
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.