Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
aspgAsparaginase homolog (S. cerevisiae). (634 aa)    
Predicted Functional Partners:
asrgl1
Asparaginase like 1.
    
 
 0.696
LOC106957972
Si:dkey-103j14.5.
    
 
 0.696
asns
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.684
LOC106936190
Taspase, threonine aspartase, 1.
    
 
 0.655
TASP1
Threonine aspartase 1-like.
    
 
 0.655
ENSPLAP00000016948
Rho-GAP domain-containing protein.
      
 0.546
nags
N-acetylglutamate synthase.
     
 0.523
ift81
Intraflagellar transport 81 homolog.
    
 0.512
ift88
Intraflagellar transport 88 homolog.
   
 0.496
chdh
Choline dehydrogenase.
  
 0.495
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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