Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106959856Uncharacterized protein. (1690 aa)    
Predicted Functional Partners:
mttp
Microsomal triglyceride transfer protein.
   
 0.890
LOC106938462
Uncharacterized protein.
   
 0.890
LOC106938461
Uncharacterized protein.
   
 0.890
LOC106965007
Apolipoprotein A-Ib.
   
 0.696
LOC106938463
Apolipoprotein Eb.
   
 0.650
LOC106946887
Apolipoprotein Ea.
   
 0.650
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
    
 0.613
LOC106954136
Intersectin 2b.
     
  0.595
ENSPLAP00000017806
Uncharacterized protein.
     
  0.595
ENSPLAP00000030866
Uncharacterized protein.
     
  0.595
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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