STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000003083C1q domain-containing protein. (104 aa)    
Predicted Functional Partners:
ENSPLAP00000020611
TROVE domain-containing protein.
    
  0.596
ENSPLAP00000020621
Uncharacterized protein.
    
  0.596
nit2
Nitrilase family, member 2.
      
 0.589
lamc1
Laminin, gamma 1.
   
 0.566
nt5dc1
5'-nucleotidase domain containing 1.
      
 0.553
frem1
Fras1 related extracellular matrix 1a.
      
 0.550
LOC106950009
Complement C1q C chain.
    
  0.540
crim1
Uncharacterized protein.
     
 0.528
sema3g
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family.
      
 0.508
ENSPLAP00000005771
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
  0.506
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: medium (44%) [HD]