Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
plod3Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3. (732 aa)    
Predicted Functional Partners:
LOC106961224
Collagen beta(1-O)galactosyltransferase 2.
   
0.964
LOC106948344
Cerebral endothelial cell adhesion molecule.
   
0.964
LOC106945972
Uncharacterized protein.
   
0.964
colgalt1
Collagen beta(1-O)galactosyltransferase 1.
   
0.964
plod2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
  
  
 
0.901
plod1
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
  
  
 
0.901
camkmt
Calmodulin-lysine N-methyltransferase.
     
  0.900
LOC106957654
Euchromatic histone-lysine N-methyltransferase 1b.
    
  0.774
LOC106951540
Euchromatic histone-lysine N-methyltransferase 1a.
    
  0.774
ehmt2
Euchromatic histone-lysine N-methyltransferase 2.
    
  0.774
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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