STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
brinp1Bone morphogenetic protein/retinoic acid inducible neural-specific 1. (723 aa)    
Predicted Functional Partners:
sirt1
Sirtuin 1.
    
 
 0.748
LOC106936917
Collagen, type IX, alpha 1b.
      
 0.589
smpdl3a
Acid sphingomyelinase-like phosphodiesterase.
      
 0.579
LOC106961221
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
      
 0.552
LOC106956600
Uncharacterized protein.
      
 0.551
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
      
 0.520
akt1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
      
 0.514
nsmaf
Neutral sphingomyelinase (N-SMase) activation associated factor.
      
 0.487
cnep1r1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
      
 0.485
dusp12
Dual specificity phosphatase 12.
      
 0.410
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.