Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106949946Lecithin retinol acyltransferase b, tandem duplicate 1. (241 aa)    
Predicted Functional Partners:
LOC106962756
Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
 0.952
LOC106946743
Si:ch1073-13h15.3.
     
 0.950
RETSAT
Retinol saturase.
     
 0.950
LOC106953308
Uncharacterized protein.
     
 0.950
LOC106935641
Amino_oxidase domain-containing protein.
     
 0.950
LOC106950304
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.949
rdh10
Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.949
LOC106964853
Retinoid isomerohydrolase RPE65 b.
     
 0.940
rpe65
Retinoid isomerohydrolase RPE65 a.
     
 0.940
LOC106946045
O-acyltransferase.
     
 0.938
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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