Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ALPK1Alpha kinase 1. (1089 aa)    
Predicted Functional Partners:
ENSPLAP00000021939
Si:ch211-15b10.6.
   
 0.920
LOC106946883
Si:ch211-15b10.6.
   
 0.920
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
     
 0.758
sass6
Sas6_CC domain-containing protein.
      
 0.684
REXO5
RNA exonuclease 5.
      
 0.667
gps2
G protein pathway suppressor 2.
      
 0.660
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
     
 0.656
phf23
PHD finger protein 23b.
      
 0.653
tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
     
  0.645
rps27a
Ribosomal protein S27a.
     
  0.645
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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