STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000003131Uncharacterized protein. (328 aa)    
Predicted Functional Partners:
LOC106964201
Uncharacterized protein.
 
     0.930
homez
Homeobox and leucine zipper encoding a.
    
 0.571
trappc12
Trafficking protein particle complex 12.
      
 0.517
ENSPLAP00000002464
Myelin regulatory factor.
    
 
 0.517
cnot1
CCR4-NOT transcription complex, subunit 1.
      
 0.517
smg6
SMG6 nonsense mediated mRNA decay factor.
      
 0.517
LOC106957959
Myotilin.
   
  
 0.490
LOC106963000
PAS domain containing serine/threonine kinase.
    
 0.476
rps27a
Ribosomal protein S27a.
    
  0.474
nrap
Nebulin-related anchoring protein.
   
   0.467
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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