Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000003133FSA_C domain-containing protein. (676 aa)    
Predicted Functional Partners:
ENSPLAP00000003180
Uncharacterized protein.
 
     0.924
ENSPLAP00000003154
Uncharacterized protein.
 
      0.899
ccdc28a
Coiled-coil domain containing 28A.
    
   0.766
C1orf43
Chromosome 1 open reading frame 43.
    
 
 0.724
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
    
 
 0.719
adad1
Adenosine deaminase domain containing 1 (testis-specific).
      
 0.657
LOC106935178
Zgc:123238.
    
 
 0.639
kiaa0100
Si:ch211-259g3.4.
   
  
 0.541
ccdc28b
Coiled-coil domain containing 28B.
    
   0.528
LOC106961237
Opioid growth factor receptor.
    
   0.521
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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