STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000003135Uncharacterized protein. (404 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
   
    0.828
LOC106956257
LsmAD domain-containing protein.
    
 
 0.668
fmr1
Fragile X mental retardation 1.
   
 
 0.655
fam98a
Family with sequence similarity 98 member A.
    
 
 0.642
ddx6
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.
   
 
 0.604
LOC106946892
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.604
g3bp2
Zgc:56304.
    
 
 0.602
g3bp1
GTPase activating protein (SH3 domain) binding protein 1.
    
 
 0.602
lsm12
LSM12 homolog b.
    
 
 0.594
LOC106957240
Im:7138535.
    
 
 0.562
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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