ENSPLAP00000003137 protein (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPQ	ENSPLAP00000003137	ENSPLAP00000026171	ENSPLAP00000003137	Carboxypeptidase Q.	MHC_I-like_Ag-recog domain-containing protein.	0.413
ENSPLAP00000003137	CPQ	ENSPLAP00000003137	ENSPLAP00000026171	MHC_I-like_Ag-recog domain-containing protein.	Carboxypeptidase Q.	0.413
ENSPLAP00000003137	LOC106935766	ENSPLAP00000003137	ENSPLAP00000023780	MHC_I-like_Ag-recog domain-containing protein.	Uncharacterized protein.	0.413
ENSPLAP00000003137	LOC106939877	ENSPLAP00000003137	ENSPLAP00000010800	MHC_I-like_Ag-recog domain-containing protein.	Transferrin receptor 2.	0.413
ENSPLAP00000003137	LOC106959762	ENSPLAP00000003137	ENSPLAP00000024271	MHC_I-like_Ag-recog domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.560
ENSPLAP00000003137	LOC106961458	ENSPLAP00000003137	ENSPLAP00000016328	MHC_I-like_Ag-recog domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.560
ENSPLAP00000003137	LOC106964619	ENSPLAP00000003137	ENSPLAP00000004648	MHC_I-like_Ag-recog domain-containing protein.	RPA_C domain-containing protein.	0.560
ENSPLAP00000003137	epo	ENSPLAP00000003137	ENSPLAP00000022842	MHC_I-like_Ag-recog domain-containing protein.	Erythropoietin; Erythropoietin is the principal hormone involved in the regulation of erythrocyte differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Belongs to the EPO/TPO family.	0.413
ENSPLAP00000003137	rpa2	ENSPLAP00000003137	ENSPLAP00000030033	MHC_I-like_Ag-recog domain-containing protein.	Replication protein A2.	0.560
ENSPLAP00000003137	sass6	ENSPLAP00000003137	ENSPLAP00000026061	MHC_I-like_Ag-recog domain-containing protein.	Sas6_CC domain-containing protein.	0.560
ENSPLAP00000003137	stn1	ENSPLAP00000003137	ENSPLAP00000006506	MHC_I-like_Ag-recog domain-containing protein.	CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication.	0.560
LOC106935766	ENSPLAP00000003137	ENSPLAP00000023780	ENSPLAP00000003137	Uncharacterized protein.	MHC_I-like_Ag-recog domain-containing protein.	0.413
LOC106935766	LOC106939877	ENSPLAP00000023780	ENSPLAP00000010800	Uncharacterized protein.	Transferrin receptor 2.	0.903
LOC106935766	LOC106959762	ENSPLAP00000023780	ENSPLAP00000024271	Uncharacterized protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.455
LOC106935766	LOC106961458	ENSPLAP00000023780	ENSPLAP00000016328	Uncharacterized protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.455
LOC106935766	LOC106964619	ENSPLAP00000023780	ENSPLAP00000004648	Uncharacterized protein.	RPA_C domain-containing protein.	0.455
LOC106935766	rpa2	ENSPLAP00000023780	ENSPLAP00000030033	Uncharacterized protein.	Replication protein A2.	0.455
LOC106939877	ENSPLAP00000003137	ENSPLAP00000010800	ENSPLAP00000003137	Transferrin receptor 2.	MHC_I-like_Ag-recog domain-containing protein.	0.413
LOC106939877	LOC106935766	ENSPLAP00000010800	ENSPLAP00000023780	Transferrin receptor 2.	Uncharacterized protein.	0.903
LOC106939877	LOC106959762	ENSPLAP00000010800	ENSPLAP00000024271	Transferrin receptor 2.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.455